Ecole Thematique FieldEpiGen
25-29/6/2018 - Programme
Monday / Lundi 25/6:
-
10:00 - 12:00 arrival (CBETM, Bat R)
-
key reception and luggage drop
-
WiFi pass
-
campus map
-
-
12:00 - 14:00 lunch - cafeteria
-
14:00 - 17:00 Experimental and sampling strategies (E. Danchin, J. Vidal Dupiol) - lecture room BU
-
19:00 - 20:30 Welcome reception (CBETM, Bat R)
Tuesday / Mardi 26/6:
-
2 parallel morning sessions: population ATAC-Seq (R. Augusto / C. Grunau / O. Rey / C. Cosseau) and
Mobilome-seq (M. Mirouze), please choose one for the week-
09:00 - 12:30 ATAC Step 1A (ATAC) and 1B (Library generation) - practical class room C113
-
09:00 - 12:00 Mobilome Step ONT-1/MOB-3 - practical class room C114
-
-
12:30 - 14:00 lunch - cafeteria
-
14:00 - 17:00 epiGBS (K. Verhoeven) - lecture room BU
-
18:30 bus departure for beach dinner and round table discussion
-
21:00 return to Perpignan
Wednesday / Mercredi 27/6:
-
2 parallel sessions
-
09:00 - 11:00 ATAC Step 2A (library normalisation) - Bat R CBETM
-
09:00 - 12:00 Mobilome Step MOB-4 - practical class room C114
-
-
12:30 - 14:00 lunch - cafeteria
-
2 parallel sessions
-
14:00 - 16:00 ATAC Step 2B (sequencing) - Bat R CBETM, and theory of next day's analysis - seminar room CBETM
-
14:00 - 16:00 Mobilome Step ONT-2 - practical class computer room
-
-
16:30 - 18:00 alternative methods (MeDIP-Seq, RRBS, ChIPmentation) made easy (by Diagenode) - seminar room CBETM
-
19:00 public transport to downtown Perpignan
-
19:30 dinner downtown Perpignan, then free evening
Thursday / Jeudi 28/6:
-
2 parallel sessions
-
09:00 - 12:00 ATAC Step 3A (quality check) - practical class computer room
-
09:00 - 12:00 Mobilome Step MOB-5/MOB-6 - practical class room C114 / computer room 2
-
-
12:30 - 14:00 lunch - cafeteria
-
2 parallel sessions
-
14:00 - 17:00 ATAC Step 3B (peak calling) - practical class computer room
-
14:00 - 17:00 Mobilome Step ONT-3/MOB-6 - practical class computer room 2
-
-
17:30 bus departure for Banyuls-sur-mer
-
18:30 guided visit Biodiversarium
-
19:30 dinner and round table discussion "Challenges in population epigenetics"
-
22:00 return to Perpignan
Friday / Vendredi 29/6:
-
09:00 - 12:00 Population epigenetics (P. David) - lecture room BU or computer room
-
12:30 - 13:00 debriefing
-
13:00 take away lunch and departure